Dr. Amara Bennett
Postdoctoral Researcher, Computational Biology
Madison, WI · amara.bennett@email.edu · orcid.org/0000-0000-0000-0000
Education
PhD Computational Biology, University of Michigan2018 - 2023
BS Biochemistry, summa cum laude, University of Minnesota2014 - 2018
Research experience
Postdoctoral Researcher, University of Wisconsin-Madison2023 - Present
•Lead a single-cell atlas project across 40 tissue samples, with two papers in review.
•Co-supervise three PhD students and run the lab's analysis workshop.
Doctoral Researcher, University of Michigan2018 - 2023
•Developed a clustering method for sparse single-cell data, now used by 20+ labs.
•Thesis: Statistical methods for cell-type discovery in ageing tissue.
Publications
•Bennett A, et al. Cell-type mapping of the ageing kidney. Genome Research (2024).
•Bennett A, Hart J. Fast clustering for sparse single-cell data. Bioinformatics (2022).
•Hart J, Bennett A, Liu M. Batch effects in multi-site atlases. Nature Methods (2021).
Presentations
•Invited talk, Single Cell Genomics Conference, Boston (2025).
•Oral presentation, ISMB, Madison (2022).
Teaching
•Instructor, Introduction to Bioinformatics (2021, 2022), 60 students
•Teaching assistant, Biostatistics I (2019, 2020)
Grants and awards
•NIH F32 Postdoctoral Fellowship (2024 - 2027)
•Best Poster, ISMB (2022)
•Rackham Predoctoral Fellowship (2022)
Skills
Single-cell RNA-seq · R · Python · Statistical genomics · Grant writing · Teaching
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